CSC110 - Python - Multiple Files -  Programming - Code - Computer Science Assessment Answer
Assessment Task:

learning outcomes:

When you have completed this assignment, you should understand: 

  • That well-tested functions that operate on lists work the same no matter the size of the list

  • How to read data from a text file using Python

    

PART  1:         Setting           the      stage  (lists   and     loops)

An important task in bioinformatics is the identification of DNA and RNA sequences. In this assignment, we will be looking atnucleic acid sequences. These sequences contain up to four different bases denoted by letters: A for adenine, C for cytosine, G for guanine, and T for thymine. Sequence strings are compared in order to determine whether nucleic acid sequences match each other, or are related through mutations. Real sequence data as used by biochemists and in bioinformatics research consist of very long strings of A, C, G and T.

          

            

PART  2: Running your code with large sequences      (File    IO)!      

On the Connex course page in the Files section for Assignment 7, there are a number of text files containing sequence data. Each file contains sequences (strings) separated by spaces. Your task is to read the data from a file and put it into a list. From there you can run each of your functions you designed in Part 1 to obtain some statistics about the input files. 

 

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  • Posted on : November 01st, 2018

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